The EU is undergoing a major customs reform. From 1 July 2026, a flat EUR 3 customs duty per item applies to goods valued at EUR 150 or less entering the EU from third countries. A handling fee will also apply from 1 November 2026. The European Commission has now published explanatory guidance on the EUR 3 customs duty and the EU handling fee, including how VAT applies to each.
VAT Treatment of Customs and Handling Fees
The introduction of the temporary EUR 3 customs duty does not change the existing VAT arrangements for imported goods in consignments valued at up to EUR 150. The Import One-Stop Shop (IOSS), the Special Arrangements, and the standard VAT procedure continue to apply under their existing rules. The existing EU guidance on low-value consignments and VAT e-commerce rules therefore remains applicable.
The VAT treatment of the EU handling fee differs. It is considered payment for a service provided by customs authorities in connection with each distance sale of imported goods (DSIG). Importantly, the handling fee applies to distance sales regardless of whether the goods have a value below or above EUR 150.
For VAT purposes, the handling fee is considered an incidental expense connected with the supply of the goods. Under the EU VAT Directive, this means that the handling fee must be included in the VAT taxable amount. Consequently, VAT is also charged on the handling fee.
In addition to clarifying general rules, the Commission also noted that the VAT treatment of the EU handling fee depends on which VAT procedure is used for the DSIG. In particular, the Commission provided three different scenarios and VAT treatments: when goods valued at up to EUR 150 are imported under the IOSS; when the Special Arrangements, which can be used instead of IOSS for consignments not exceeding EUR 150, is used; and when the standard import procedure is used.
Conclusion
Businesses should note that the explanatory guidance is not legally binding, and that in case of any conflict between the guidance and the applicable EU customs legislation, the legislation takes precedence. However, the guidance provides practical clarity on how these customs reform measures interact with existing VAT rules, helping taxable persons prepare for compliance ahead of implementation.

